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1.

Human microglia maturation is underpinned by specific gene regulatory networks.

Han, Claudia Z; Li, Rick Z; Hansen, Emily; Trescott, Samantha; Fixsen, Bethany R; Nguyen, Celina T; Mora, Cristina M; Spann, Nathanael J; Bennett, Hunter R; Poirion, Olivier; Buchanan, Justin; Warden, Anna S; Xia, Bing; Schlachetzki, Johannes C M; Pasillas, Martina P; Preissl, Sebastian; Wang, Allen; O'Connor, Carolyn; Shriram, Shreya; Kim, Roy; Schafer, Danielle; Ramirez, Gabriela; Challacombe, Jean; Anavim, Samuel A; Johnson, Avalon; Gupta, Mihir; Glass, Ian A; Levy, Michael L; Haim, Sharona Ben; Gonda, David D; Laurent, Louise; Hughes, Jennifer F; Page, David C; Blurton-Jones, Mathew; Glass, Christopher K; Coufal, Nicole G.

Immunity ; 56(9): 2152-2171.e13, 2023 09 12.

Artículo en Inglés | MEDLINE | ID: mdl-37582369

2.

Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes.

Soh, Y Q Shirleen; Alföldi, Jessica; Pyntikova, Tatyana; Brown, Laura G; Graves, Tina; Minx, Patrick J; Fulton, Robert S; Kremitzki, Colin; Koutseva, Natalia; Mueller, Jacob L; Rozen, Steve; Hughes, Jennifer F; Owens, Elaine; Womack, James E; Murphy, William J; Cao, Qing; de Jong, Pieter; Warren, Wesley C; Wilson, Richard K; Skaletsky, Helen; Page, David C.

Cell ; 159(4): 800-13, 2014 Nov 06.

Artículo en Inglés | MEDLINE | ID: mdl-25417157

3.

Large palindromes on the primate X Chromosome are preserved by natural selection.

Jackson, Emily K; Bellott, Daniel W; Cho, Ting-Jan; Skaletsky, Helen; Hughes, Jennifer F; Pyntikova, Tatyana; Page, David C.

Genome Res ; 31(8): 1337-1352, 2021 08.

Artículo en Inglés | MEDLINE | ID: mdl-34290043

4.

Sequence analysis in Bos taurus reveals pervasiveness of X-Y arms races in mammalian lineages.

Hughes, Jennifer F; Skaletsky, Helen; Pyntikova, Tatyana; Koutseva, Natalia; Raudsepp, Terje; Brown, Laura G; Bellott, Daniel W; Cho, Ting-Jan; Dugan-Rocha, Shannon; Khan, Ziad; Kremitzki, Colin; Fronick, Catrina; Graves-Lindsay, Tina A; Fulton, Lucinda; Warren, Wesley C; Wilson, Richard K; Owens, Elaine; Womack, James E; Murphy, William J; Muzny, Donna M; Worley, Kim C; Chowdhary, Bhanu P; Gibbs, Richard A; Page, David C.

Genome Res ; 30(12): 1716-1726, 2020 12.

Artículo en Inglés | MEDLINE | ID: mdl-33208454

5.

The Biology and Evolution of Mammalian Y Chromosomes.

Hughes, Jennifer F; Page, David C.

Annu Rev Genet ; 49: 507-27, 2015.

Artículo en Inglés | MEDLINE | ID: mdl-26442847

6.

A gene deriving from the ancestral sex chromosomes was lost from the X and retained on the Y chromosome in eutherian mammals.

Hughes, Jennifer F; Skaletsky, Helen; Nicholls, Peter K; Drake, Alexis; Pyntikova, Tatyana; Cho, Ting-Jan; Bellott, Daniel W; Page, David C.

BMC Biol ; 20(1): 133, 2022 06 09.

Artículo en Inglés | MEDLINE | ID: mdl-35676717

7.

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators.

Bellott, Daniel W; Hughes, Jennifer F; Skaletsky, Helen; Brown, Laura G; Pyntikova, Tatyana; Cho, Ting-Jan; Koutseva, Natalia; Zaghlul, Sara; Graves, Tina; Rock, Susie; Kremitzki, Colin; Fulton, Robert S; Dugan, Shannon; Ding, Yan; Morton, Donna; Khan, Ziad; Lewis, Lora; Buhay, Christian; Wang, Qiaoyan; Watt, Jennifer; Holder, Michael; Lee, Sandy; Nazareth, Lynne; Alföldi, Jessica; Rozen, Steve; Muzny, Donna M; Warren, Wesley C; Gibbs, Richard A; Wilson, Richard K; Page, David C.

Nature ; 508(7497): 494-9, 2014 Apr 24.

Artículo en Inglés | MEDLINE | ID: mdl-24759411

8.

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes.

Hughes, Jennifer F; Skaletsky, Helen; Brown, Laura G; Pyntikova, Tatyana; Graves, Tina; Fulton, Robert S; Dugan, Shannon; Ding, Yan; Buhay, Christian J; Kremitzki, Colin; Wang, Qiaoyan; Shen, Hua; Holder, Michael; Villasana, Donna; Nazareth, Lynne V; Cree, Andrew; Courtney, Laura; Veizer, Joelle; Kotkiewicz, Holland; Cho, Ting-Jan; Koutseva, Natalia; Rozen, Steve; Muzny, Donna M; Warren, Wesley C; Gibbs, Richard A; Wilson, Richard K; Page, David C.

Nature ; 483(7387): 82-6, 2012 Feb 22.

Artículo en Inglés | MEDLINE | ID: mdl-22367542

9.

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content.

Hughes, Jennifer F; Skaletsky, Helen; Pyntikova, Tatyana; Graves, Tina A; van Daalen, Saskia K M; Minx, Patrick J; Fulton, Robert S; McGrath, Sean D; Locke, Devin P; Friedman, Cynthia; Trask, Barbara J; Mardis, Elaine R; Warren, Wesley C; Repping, Sjoerd; Rozen, Steve; Wilson, Richard K; Page, David C.

Nature ; 463(7280): 536-9, 2010 Jan 28.

Artículo en Inglés | MEDLINE | ID: mdl-20072128

10.

Genomics and genetics of human and primate y chromosomes.

Hughes, Jennifer F; Rozen, Steve.

Annu Rev Genomics Hum Genet ; 13: 83-108, 2012.

Artículo en Inglés | MEDLINE | ID: mdl-22483277

11.

Sequencing of rhesus macaque Y chromosome clarifies origins and evolution of the DAZ (Deleted in AZoospermia) genes.

Hughes, Jennifer F; Skaletsky, Helen; Page, David C.

Bioessays ; 34(12): 1035-44, 2012 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-23055411

12.

Stable and robust Xi and Y transcriptomes drive cell-type-specific autosomal and Xa responses in vivo and in vitro in four human cell types.

Blanton, Laura V; San Roman, Adrianna K; Wood, Geryl; Buscetta, Ashley; Banks, Nicole; Skaletsky, Helen; Godfrey, Alexander K; Pham, Thao T; Hughes, Jennifer F; Brown, Laura G; Kruszka, Paul; Lin, Angela E; Kastner, Daniel L; Muenke, Maximilian; Page, David C.

bioRxiv ; 2024 Mar 19.

Artículo en Inglés | MEDLINE | ID: mdl-38562807

13.

The human Y and inactive X chromosomes similarly modulate autosomal gene expression.

San Roman, Adrianna K; Skaletsky, Helen; Godfrey, Alexander K; Bokil, Neha V; Teitz, Levi; Singh, Isani; Blanton, Laura V; Bellott, Daniel W; Pyntikova, Tatyana; Lange, Julian; Koutseva, Natalia; Hughes, Jennifer F; Brown, Laura; Phou, Sidaly; Buscetta, Ashley; Kruszka, Paul; Banks, Nicole; Dutra, Amalia; Pak, Evgenia; Lasutschinkow, Patricia C; Keen, Colleen; Davis, Shanlee M; Lin, Angela E; Tartaglia, Nicole R; Samango-Sprouse, Carole; Muenke, Maximilian; Page, David C.

Cell Genom ; 4(1): 100462, 2024 Jan 10.

Artículo en Inglés | MEDLINE | ID: mdl-38190107

14.

The human inactive X chromosome modulates expression of the active X chromosome.

San Roman, Adrianna K; Godfrey, Alexander K; Skaletsky, Helen; Bellott, Daniel W; Groff, Abigail F; Harris, Hannah L; Blanton, Laura V; Hughes, Jennifer F; Brown, Laura; Phou, Sidaly; Buscetta, Ashley; Kruszka, Paul; Banks, Nicole; Dutra, Amalia; Pak, Evgenia; Lasutschinkow, Patricia C; Keen, Colleen; Davis, Shanlee M; Tartaglia, Nicole R; Samango-Sprouse, Carole; Muenke, Maximilian; Page, David C.

Cell Genom ; 3(2): 100259, 2023 Feb 08.

Artículo en Inglés | MEDLINE | ID: mdl-36819663

15.

The human Y and inactive X chromosomes similarly modulate autosomal gene expression.

San Roman, Adrianna K; Skaletsky, Helen; Godfrey, Alexander K; Bokil, Neha V; Teitz, Levi; Singh, Isani; Blanton, Laura V; Bellott, Daniel W; Pyntikova, Tatyana; Lange, Julian; Koutseva, Natalia; Hughes, Jennifer F; Brown, Laura; Phou, Sidaly; Buscetta, Ashley; Kruszka, Paul; Banks, Nicole; Dutra, Amalia; Pak, Evgenia; Lasutschinkow, Patricia C; Keen, Colleen; Davis, Shanlee M; Lin, Angela E; Tartaglia, Nicole R; Samango-Sprouse, Carole; Muenke, Maximilian; Page, David C.

bioRxiv ; 2023 Jun 07.

Artículo en Inglés | MEDLINE | ID: mdl-37333288

16.

SHIMS 3.0: Highly efficient single-haplotype iterative mapping and sequencing using ultra-long nanopore reads.

Bellott, Daniel W; Cho, Ting-Jan; Jackson, Emily K; Skaletsky, Helen; Hughes, Jennifer F; Page, David C.

PLoS One ; 17(6): e0269692, 2022.

Artículo en Inglés | MEDLINE | ID: mdl-35700171

17.

Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.

Hughes, Jennifer F; Skaletsky, Helen; Pyntikova, Tatyana; Minx, Patrick J; Graves, Tina; Rozen, Steve; Wilson, Richard K; Page, David C.

Nature ; 437(7055): 100-3, 2005 Sep 01.

Artículo en Inglés | MEDLINE | ID: mdl-16136134

18.

No bull: upholding community standards in public sharing of biological datasets.

Hughes, Jennifer F; Skaletsky, Helen; Bellott, D Winston; Chowdhary, Bhanu P; Warren, Wesley C; Worley, Kim C; Wilson, Richard K; Gibbs, Richard A; Page, David C.

Proc Natl Acad Sci U S A ; 110(46): E4277, 2013 Nov 12.

Artículo en Inglés | MEDLINE | ID: mdl-24173037

19.

Has the chimpanzee Y chromosome been sequenced?

Hughes, Jennifer F; Skaletsky, Helen; Rozen, Steve; Wilson, Richard K; Page, David C.

Nat Genet ; 38(8): 853-4; author reply 854-5, 2006 Aug.

Artículo en Inglés | MEDLINE | ID: mdl-16874316

20.

Conservation, acquisition, and functional impact of sex-biased gene expression in mammals.

Naqvi, Sahin; Godfrey, Alexander K; Hughes, Jennifer F; Goodheart, Mary L; Mitchell, Richard N; Page, David C.

Science ; 365(6450)2019 07 19.

Artículo en Inglés | MEDLINE | ID: mdl-31320509

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Human microglia maturation is underpinned by specific gene regulatory networks.

Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes.

Large palindromes on the primate X Chromosome are preserved by natural selection.

Sequence analysis in Bos taurus reveals pervasiveness of X-Y arms races in mammalian lineages.

The Biology and Evolution of Mammalian Y Chromosomes.

A gene deriving from the ancestral sex chromosomes was lost from the X and retained on the Y chromosome in eutherian mammals.

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators.

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes.

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content.

Genomics and genetics of human and primate y chromosomes.

Sequencing of rhesus macaque Y chromosome clarifies origins and evolution of the DAZ (Deleted in AZoospermia) genes.

Stable and robust Xi and Y transcriptomes drive cell-type-specific autosomal and Xa responses in vivo and in vitro in four human cell types.

The human Y and inactive X chromosomes similarly modulate autosomal gene expression.

The human inactive X chromosome modulates expression of the active X chromosome.

The human Y and inactive X chromosomes similarly modulate autosomal gene expression.

SHIMS 3.0: Highly efficient single-haplotype iterative mapping and sequencing using ultra-long nanopore reads.

Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.

No bull: upholding community standards in public sharing of biological datasets.

Has the chimpanzee Y chromosome been sequenced?

Conservation, acquisition, and functional impact of sex-biased gene expression in mammals.